Items where Subject is "protein network design"

Paper

Cifani, Paolo, Kentsis, Alex (October 2022) Quantitative Cell Proteomic Atlas: Pathway-Scale Targeted Mass Spectrometry for High-Resolution Functional Profiling of Cell Signaling. Journal of Proteome Research, 21 (10). pp. 2535-2544. ISSN 1535-3893

Consortium, Arabidopsis Interactome Mapping (July 2011) Evidence for Network Evolution in an Arabidopsis Interactome Map. Science, 333 (6042). pp. 601-607.

Duggal, Geet, Navlakha, Saket, Girvan, Michelle, Kingsford, Carl (July 2010) Uncovering Many Views of Biological Networks Using Ensembles of Near-Optimal Partitions. MultiClust: 1st International Workshop on Discovering, Summarizing and Using Multiple ClusteringsHeld in Conjunction with KDD-2019.

Gillis, J., Ballouz, S., Pavlidis, P. (January 2014) Bias tradeoffs in the creation and analysis of protein-protein interaction networks. Journal of Proteomics, 100. pp. 44-54.

Navlakha, S., Gitter, A., Bar-Joseph, Z. (August 2012) A network-based approach for predicting missing pathway interactions. PLoS Comput Biol, 8 (8). e1002640. ISSN 1553-734x

Navlakha, S., Kingsford, C. (April 2010) The power of protein interaction networks for associating genes with diseases. Bioinformatics, 26 (8). pp. 1057-63. ISSN 1367-4803 (Public Dataset)

Navlakha, S., Schatz, M. C., Kingsford, C. (February 2009) Revealing biological modules via graph summarization. J Comput Biol, 16 (2). pp. 253-64. ISSN 1066-5277

Ohlmeyer, M. H. J., Swanson, R. N., Dillard, L. W., Reader, J. C., Asouline, G., Kobayashi, R., Wigler, M. H., Still, W. C. (December 1993) Complex synthetic chemical libraries indexed with molecular tags. Proceedings of the National Academy of Sciences of the United States of America, 90 (23). pp. 10922-10926. ISSN 0027-8424

Walhout, A. J., Sordella, R., Lu, X., Hartley, J. L., Temple, G. F., Brasch, M. A., Thierry-Mieg, N., Vidal, M. (January 2000) Protein interaction mapping in C. elegans using proteins involved in vulval development. Science, 287 (5450). pp. 116-22. ISSN 0036-8075 (Print)

Conference or Workshop Item

Aloy, P., Gavin, A. C., Ideker, T., Walhout, M. (August 2010) SYSTEMS BIOLOGY: NETWORKS. In: Joint Cold Spring Harbor Laboratory/Wellcome Trust Conference on SYSTEMS BIOLOGY: NETWORKS, August 11–August 15, 2010, Wellcome Trust Conference Center, Hixton UK.

Book

Navlakha, S., White, J., Nagarajan, N., Pop, M., Kingsford, C. (May 2009) Finding biologically accurate clusterings in hierarchical tree decompositions using the variation of information. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 5541 L . Springer, pp. 400-417. ISBN 03029743 (ISSN); 9783642020070 (ISBN)