Browse by CSHL Author

Paper

Szadai, Zoltán, Pi, Hyun-Jae, Chevy, Quentin, Ócsai, Katalin, Albeanu, Dinu F, Chiovini, Balázs, Szalay, Gergely, Katona, Gergely, Kepecs, Adam, Rózsa, Balázs (November 2022) Cortex-wide response mode of VIP-expressing inhibitory neurons by reward and punishment. eLife, 11. e78815. ISSN 2050-084X

Redish, A David, Kepecs, Adam, Anderson, Lisa M, Calvin, Olivia L, Grissom, Nicola M, Haynos, Ann F, Heilbronner, Sarah R, Herman, Alexander B, Jacob, Suma, Ma, Sisi, Vilares, Iris, Vinogradov, Sophia, Walters, Cody J, Widge, Alik S, Zick, Jennifer L, Zilverstand, Anna (February 2022) Computational validity: using computation to translate behaviours across species. Philosophical Transactions of the Royal Society B: Biological Sciences, 377 (1844). p. 20200525. ISSN 0962-8436

Schmack, Katharina, Ott, Torben, Kepecs, Adam (November 2021) Computational Psychiatry Across Species to Study the Biology of Hallucinations. JAMA Psychiatry. ISSN 2168-622X

Joo, Hannah R, Liang, Hexin, Chung, Jason E, Geaghan-Breiner, Charlotte, Fan, Jiang Lan, Nachman, Benjamin P, Kepecs, Adam, Frank, Loren M (August 2021) Rats use memory confidence to guide decisions. Current Biology. ISSN 0960-9822

Schmack, K, Bosc, M, Ott, T, Sturgill, JF, Kepecs, A (April 2021) Striatal dopamine mediates hallucination-like perception in mice. Science, 372 (6537). eabf4740-eabf4740. ISSN 0036-8075

Laszlovszky, T., Schlingloff, D., Hegedüs, P., Freund, T. F., Gulyás, A., Kepecs, A., Hangya, B. (August 2020) Publisher Correction: Distinct synchronization, cortical coupling and behavioral function of two basal forebrain cholinergic neuron types. Nat Neurosci. ISSN 1097-6256

Browning, Michael, Carter, Cameron S, Chatham, Christopher, Den Ouden, Hanneke, Gillan, Claire M, Baker, Justin T, Chekroud, Adam M, Cools, Roshan, Dayan, Peter, Gold, James, Goldstein, Rita Z, Hartley, Catherine A, Kepecs, Adam, Lawson, Rebecca P, Mourao-Miranda, Janaina, Phillips, Mary L, Pizzagalli, Diego A, Powers, Albert, Rindskopf, David, Roiser, Jonathan P, Schmack, Katharina, Schiller, Daniela, Sebold, Miriam, Stephan, Klaas Enno, Frank, Michael J, Huys, Quentin, Paulus, Martin (July 2020) Realizing the Clinical Potential of Computational Psychiatry: Report From the Banbury Center Meeting, February 2019. Biological Psychiatry, 88 (2). e5-e10. ISSN 0006-3223

Laszlovszky, T, Schlingloff, D, Hegedüs, P, Freund, T. F., Gulyás, A., Kepecs, A., Hangya, B. (June 2020) Distinct Synchronization, Cortical Coupling and Behavioral Function of Two Basal Forebrain Cholinergic Neuron Types. Nature Neuroscience, 23 (8). pp. 992-1003. ISSN 1097-6256

Masset, P., Ott, T., Lak, A., Hirokawa, J., Kepecs, A. (June 2020) Behavior- And Modality-General Representation of Confidence in Orbitofrontal Cortex. Cell, 182. ISSN 0092-8674

Monje, M., Borniger, J., D'Silva, N.J., Deneen, B., Dirks, P.B., Fattahi, F., Frenette, P.S., Garzia, L., Gutmann, D.H., Hanahan, D., Hervey-Jumper, S.L., Hondermarck, H., Hurov, J.B., Kepecs, A., Knox, S.M., Lloyd, A.C., Magnon, C., Saloman, J.L., Segal, R.A., Sloan, E.K., Sun, X., Taylor, M.D., Tracey, K.J., Trotman, L. C., Tuveson, D. A., Wang, T.C., White, R.A., Winkler, F. (April 2020) Roadmap for the Emerging Field of Cancer Neuroscience. Cell, 181 (2). pp. 219-222. ISSN 0092-8674

Lak, A., Hueske, E., Hirokawa, J., Masset, P., Ott, T., Urai, A. E., Donner, T.H., Carandini, M., Tonegawa, S., Uchida, N., Kepecs, A. (April 2020) Reinforcement Biases Subsequent Perceptual Decisions When Confidence Is Low: A Widespread Behavioral Phenomenon. Elife, 9 (e49834). ISSN 2050-084X

Mohanty, A., Li, Q., Tadayon, M. A., Roberts, S. P., Bhatt, G. R., Shim, E., Ji, X., Cardenas, J., Miller, S. A., Kepecs, A., Lipson, M. (February 2020) Reconfigurable nanophotonic silicon probes for sub-millisecond deep-brain optical stimulation. Nat Biomed Eng, 4 (2). pp. 223-231. ISSN 2157-846x (Public Dataset)

Demir, E., Li, K., Bobrowski-Khoury, N., Sanders, J. I., Beynon, R. J., Hurst, J. L., Kepecs, A., Axel, R. (January 2020) The pheromone darcin drives a circuit for innate and reinforced behaviours. Nature, 578 (7793). pp. 137-141. ISSN 0028-0836

Lak, A., Okun, M., Moss, M. M., Gurnani, H., Farrell, K., Wells, M. J., Reddy, C. B., Kepecs, A., Harris, K. D., Carandini, M. (December 2019) Dopaminergic and Prefrontal Basis of Learning from Sensory Confidence and Reward Value. Neuron. ISSN 0896-6273

Hirokawa, J., Vaughan, A., Masset, P., Ott, T., Kepecs, A. (December 2019) Frontal cortex neuron types categorically encode single decision variables. Nature, 576 (7787). pp. 446-451. ISSN 0028-0836 (Public Dataset)

Richards, B. A., Lillicrap, T. P., Beaudoin, P., Bengio, Y., Bogacz, R., Christensen, A., Clopath, C., Costa, R. P., de Berker, A., Ganguli, S., Gillon, C. J., Hafner, D., Kepecs, A., Kriegeskorte, N., Latham, P., Lindsay, G. W., Miller, K. D., Naud, R., Pack, C. C., Poirazi, P., Roelfsema, P., Sacramento, J., Saxe, A., Scellier, B., Schapiro, A. C., Senn, W., Wayne, G., Yamins, D., Zenke, F., Zylberberg, J., Therien, D., Kording, K. P. (November 2019) A deep learning framework for neuroscience. Nat Neurosci, 22 (11). pp. 1761-1770. ISSN 1097-6256

Kepecs, A. (July 2019) Summary: Order and Disorder in Brains and Behavior. Cold Spring Harb Symp Quant Biol, 83. pp. 219-225. ISSN 0091-7451

Fishell, G., Kepecs, A. (July 2019) Interneuron Types as Attractors and Controllers. Annu Rev Neurosci. ISSN 0147-006x

Ott, T., Masset, P., Kepecs, A. (July 2018) The Neurobiology of Confidence: From Beliefs to Neurons. Cold Spring Harb Symp Quant Biol, 83. pp. 9-16. ISSN 0091-7451

Li, S. J., Vaughan, A., Sturgill, J. F., Kepecs, A. (June 2018) A Viral Receptor Complementation Strategy to Overcome CAV-2 Tropism for Efficient Retrograde Targeting of Neurons. Neuron, 98 (5). 905-917 e.5. ISSN 08966273 (ISSN)

Chevy, Q., Kepecs, A. (February 2018) When Acetylcholine Unlocks Feedback Inhibition in Cortex. Neuron, 97 (3). pp. 481-484. ISSN 0896-6273

Kepecs, A. (January 2018) John Lisman 1944-2017. Nat Neurosci. ISSN 1097-6256

Lak, A., Nomoto, K., Keramati, M., Sakagami, M., Kepecs, A. (March 2017) Midbrain Dopamine Neurons Signal Belief in Choice Accuracy during a Perceptual Decision. Curr Biol, 27 (6). pp. 821-832. ISSN 0960-9822

Hangya, B., Sanders, J. L., Kepecs, A. (September 2016) A Mathematical Framework for Statistical Decision Confidence. Neural Comput, 28 (9). pp. 1840-1858. ISSN 1530-888X (Electronic)0899-7667 (Linking)

Sanders, Joshua I, Hangya, Balázs, Kepecs, Adam (May 2016) Signatures of a Statistical Computation in the Human Sense of Confidence. Neuron, 90 (3). pp. 499-506. ISSN 0896-6273

Kobak, D., Brendel, W., Constantinidis, C., Feierstein, C. E., Kepecs, A., Mainen, Z. F., Romo, R., Qi, X. L., Uchida, N., Machens, C. K. (April 2016) Demixed principal component analysis of neural population data. Elife, 5. ISSN 2050-084X (Electronic)2050-084X (Linking)

Pouget, A., Drugowitsch, J., Kepecs, A. (February 2016) Confidence and certainty: distinct probabilistic quantities for different goals. Nat Neurosci, 19 (3). pp. 366-74. ISSN 1546-1726 (Electronic)1097-6256 (Linking)

Kepecs, A., Mensh, B. D. (December 2015) Emotor control: computations underlying bodily resource allocation, emotions, and confidence. Dialogues Clin Neurosci, 17 (4). pp. 391-401. ISSN 1958-5969 (Electronic)1294-8322 (Linking)

Lin, S. C., Brown, R. E., Hussain Shuler, M. G., Petersen, C. C., Kepecs, A. (October 2015) Optogenetic Dissection of the Basal Forebrain Neuromodulatory Control of Cortical Activation, Plasticity, and Cognition. J Neurosci, 35 (41). pp. 13896-903. ISSN 1529-2401 (Electronic)0270-6474 (Linking)

Hangya, Balázs, Ranade, Sachin P, Lorenc, Maja, Kepecs, Adam (August 2015) Central Cholinergic Neurons Are Rapidly Recruited by Reinforcement Feedback. Cell, 162 (5). pp. 1155-1168. ISSN 0092-8674

Hangya, Balázs, Kepecs, Adam (June 2015) Vision: How to Train Visual Cortex to Predict Reward Time. Current Biology, 25 (12). R490-R492. ISSN 0960-9822

Sanders, J. I., Kepecs, A. (December 2014) A low-cost programmable pulse generator for physiology and behavior. Frontiers in Neuroengineering, 7 (43). ISSN 16626443

Takada, N., Pi, H. J., Sousa, V. H., Waters, J., Fishell, G., Kepecs, A., Osten, P. (October 2014) A developmental cell-type switch in cortical interneurons leads to a selective defect in cortical oscillations. Nature Communications, 5. p. 5333. ISSN 2041-1723

Lak, A., Costa, G. M., Romberg, E., Koulakov, A. A., Mainen, Z. F., Kepecs, A. (September 2014) Orbitofrontal Cortex Is Required for Optimal Waiting Based on Decision Confidence. Neuron, 84 (1). pp. 190-201. ISSN 0896-6273

Ranade, S., Pi, H.J., Kepecs, A. (September 2014) Neuroscience: Waiting for Serotonin. Current Biology, 24 (17). R803-R805. ISSN 0960-9822

Hangya, B., Pi, H. J., Kvitsiani, D., Ranade, S. P., Kepecs, A. (February 2014) From circuit motifs to computations: mapping the behavioral repertoire of cortical interneurons. Current Opinion in Neurobiology, 26c. pp. 117-124. ISSN 0959-4388

Kepecs, A., Fishell, G. (January 2014) Interneuron cell types are fit to function. Nature, 505 (7483). pp. 318-326. ISSN 0028-0836

Pi, H. J., Hangya, B., Kvitsiani, D., Sanders, J. I., Huang, Z. J., Kepecs, A. (October 2013) Cortical interneurons that specialize in disinhibitory control. Nature, 503. pp. 521-24. ISSN 1476-4687 (Electronic)0028-0836 (Linking)

Kepecs, A. (June 2013) The uncertainty of it all. Nature Neuroscience, 16 (6). pp. 660-2. ISSN 1097-6256

Kvitsiani, D., Ranade, S., Hangya, B., Taniguchi, H., Huang, J. Z., Kepecs, A. (May 2013) Distinct behavioural and network correlates of two interneuron types in prefrontal cortex. Nature, 498 (7454). pp. 363-366. ISSN 1476-4687 (Electronic)0028-0836 (Linking)

Zariwala, H. A., Kepecs, A., Uchida, N., Hirokawa, J., Mainen, Z. F. (2013) The Limits of Deliberation in a Perceptual Decision Task. Neuron, 78 (2). pp. 339-51. ISSN 08966273 (ISSN)

Ranade, S., Hangya, B., Kepecs, A. (2013) Multiple Modes of Phase Locking between Sniffing and Whisking during Active Exploration. Journal of Neuroscience, 33 (19). pp. 8250-6. ISSN 0270-6474

Sanders, J. I., Kepecs, A. (December 2012) Choice ball: A response interface for two-choice psychometric discrimination in head-fixed mice. Journal of Neurophysiology, 108 (12). pp. 3416-3423. ISSN 00223077

Kepecs, A., Mainen, Z. F. (May 2012) A computational framework for the study of confidence in humans and animals. Philos Trans R Soc Lond B Biol Sci, 367 (1594). pp. 1322-37. ISSN 1471-2970 (Electronic)0962-8436 (Linking)

Kepecs, A. (May 2011) Neuroscience: My brain made me do it. Nature, 473 (7347). pp. 280-281. ISSN 0028-0836

Poeppel, D., Brown, M., Solomon, S., Coyne, J. A., Wang, M.-W., Zittrain, J., Zimmer, C., Frankel, F., Rienhoff, H. Y., Hood, B., Shubin, N., Scott, E., Knapp, S., Kepecs, A. (July 2009) A break from the bench. Nature, 460 (7255). pp. 574-577.

Kepecs, Adam (April 2009) Decisions, decisions. Nature, 458 (7240). p. 835.

Mainen, Z. F., Kepecs, A. (February 2009) Neural representation of behavioral outcomes in the orbitofrontal cortex. Current Opinion in Neurobiology, 19 (1). pp. 84-91.

Kepecs, A., Uchida, N., Zariwala, H. A., Mainen, Z. F. (September 2008) Neural correlates, computation and behavioural impact of decision confidence. Nature, 455 (7210). pp. 227-31.

Goodhill, G., Baker, C., Balasubramanian, V., Bazhenov, M., Beck, J., Becker, S., Bethge, M., Boahen, K., Boden, M., Bonin, V., Bouret, S., Fairhall, A., Flash, T., French, R., Gillies, A., Gollisch, T., Gurney, K., Gutkin, B., Hayhoe, M., Hunt, J., Ibbotson, M., Kepecs, A., Kingdom, F., Kropff, E., Longden, K., Marder, E., Miikkulainen, R., Oliva, A., Olshausen, B., Pillow, J., Prenger, R., Redish, D., Rolls, E., Rucci, M., Breakspear, M., Bressloff, P., Bulthoff, H., Burgess, N., Burkitt, A., Butts, D., Carreira-Perpinan, M., Chklovskii, D., Eden, U., Ermentrout, B., Schmidhuber, J., Semyanov, A., Sharpee, T., Smith, A., Sommer, F., Srinivasan, M., Stanley, G., Stopfer, M., Tanaka, H., Theunissen, F., Tranchina, D., Treves, A., Van Ooyen, A., Verschure, P., Vorobyev, M., Wachtler, T., Wallis, G., Willmore, B., Wiskott, L., Wyeth, G., Zanker, J., Zetzsche, C., Zhaoping, L. (2008) Network: Computation in Neural Systems: Editorial. Network: Computation in Neural Systems, 19 (1). pp. 1-2. ISSN 0954898X (ISSN)

Kepecs, A., Uchida, N., Mainen, Z. F. (July 2007) Rapid and Precise Control of Sniffing during Olfactory Discrimination in Rats. J Neurophysiol, 98 (1). pp. 205-213. ISSN 0022-3077 (Print)

Kepecs, A., Raghavachari, S. (April 2007) Gating information by two-state membrane potential fluctuations. J Neurophysiol, 97 (4). pp. 3015-23. ISSN 0022-3077 (Print)

Uchida, N., Kepecs, A., Mainen, Z. F. (June 2006) Seeing at a glance, smelling in a whiff: rapid forms of perceptual decision making. Nature Reviews Neuroscience, 7 (6). pp. 485-91. ISSN 1471-0048

Kepecs, A., Uchida, N., Mainen, Z . F. (February 2006) The sniff as a unit of olfactory processing. Chem Senses, 31 (2). pp. 167-79. ISSN 0379-864X (Print)

Kepecs, A., Lisman, J. (June 2004) How to read a burst duration code. Neurocomputing, 58-60. pp. 1-6. ISSN 0925-2312

Kepecs, A., Lisman, J. (February 2003) Information encoding and computation with spikes and bursts. Network, 14 (1). pp. 103-18. ISSN 0954-898X (Print)

Brody, C. D., Romo, R., Kepecs, A. (2003) Basic mechanisms for graded persistent activity: Discrete attractors, continuous attractors, and dynamic representations. Current Opinion in Neurobiology, 13 (2). pp. 204-211. ISSN 09594388 (ISSN)

Kepecs, A., Wang, X. J., Lisman, J. (2002) Bursting neurons signal input slope. Journal of Neuroscience, 22 (20). pp. 9053-9062. ISSN 02706474 (ISSN)

Koulakov, A. A., Raghavachari, S., Kepecs, A., Lisman, J. E. (2002) Model for a robust neural integrator. Nature Neuroscience, 5 (8). pp. 775-782. ISSN 10976256 (ISSN)

Kepecs, A., Van Rossum, M. C. W., Song, S., Tegner, J. (2002) Spike-timing-dependent plasticity: Common themes and divergent vistas. Biological Cybernetics, 87 (5-6). pp. 446-458. ISSN 03401200 (ISSN)

Tegnér, J., Kepecs, A. (2002) An adaptive spike-timing-dependent plasticity rule. Neurocomputing, 44-46. pp. 189-194. ISSN 09252312 (ISSN)

Kepecs, A., Wang, X. J. (2000) Analysis of complex bursting in cortical pyramidal neuron models. Neurocomputing, 32-33. pp. 181-187. ISSN 09252312 (ISSN)

Lengyel, M., Kepecs, Á, Érdi, P. (1999) Location-dependent differences between somatic and dendritic IPSPs. Neurocomputing, 26-27. pp. 193-197. ISSN 09252312 (ISSN)

Bazsó, F., Kepecs, Á, Lengyel, M., Payrits, S., Szalisznyó, K., Zalányi, L., Érdi, P. (1999) Single cell and population activities in cortical-like systems. Reviews in the Neurosciences, 10 (3-4). pp. 201-212. ISSN 03341763 (ISSN)

Adorjan, P., Barna, G., Erdi, P., Grobler, T., Kepecs, A., Lengyel, M., Ventriglia, F. (1996) Multicompartmental modeling of hippocampal pyramidal cells and interneurons with the GENESIS software tool. Neurobiology, 4 (3). pp. 247-249. ISSN 12168068 (ISSN)

Book Section

Kepecs, A., Ragachavari, S. (2002) 3 State Neurons for Contextual Processing. In: Advances in Neural Information Processing Systems 14: Proceedings of the 2001 Conference. MIT Press, pp. 229-236. ISBN 9780262042062

Tegner, J., Kepecs, A (2002) Why neuronal dynamics should control synaptic learning rules. In: Advances in Neural Information Processing Systems 14: Proceedings of the 2001 Conference. MIT Press, pp. 285-292. ISBN 9780262042062

Conference or Workshop Item

Schmack, Katharina, Bosc, Marion, Sturgill, James, Ott, Torben, Kepecs, Adam (May 2021) Hallucination-Like Perception in Mice Provides Neural-Circuit Insights Into Dopamine Hypothesis of Psychosis. In: Society of Biological Psychiatry Annual Meeting.

Bonda, David, Rolle, Cammie, Shivacharan, Rajat, Johnson, Noriah, Barbosa, Daniel, Wulf, Michael, Md, Amit Etkin, Williams, Nolan, Md, Josef Parvizii, Kepecs, Adam, Halpern, Casey (2021) Causal Manipulation of Anterior Cingulate Neurons in Mice and Human Selectively Affects Approach during Reward-Threat Conflict. In: Annual Scientific Meeting of the American-Association-of-Neurological-Surgeons (AANS), AUG 21-25, 2021.

Bonda, David, Wulf, Michael, Kepecs, Adam (December 2020) A Functional Circuit for Executive Control. In: Congress of Neurological Surgeons 2020.

Bonda, David, Wulf, Michael, Kepecs, Adam (April 2020) A Functional Circuit for Executive Control. In: Annual Scientific Meeting of the American-Association-of-Neurological-Surgeons (AANS).

Shuvaev, S, Starosta, S, Kvitsiani, D, Kepecs, A, Koulakov, A (January 2020) R-learning in actor-critic model offers a biologically relevant mechanism for sequential decision-making. In: NeurIPS 2020.

Pinkhasov, Tzvia, Starosta, Sarah, Kepecs, Adam (December 2019) Midbrain Dopamine Neuron Activity Predicts Impulsive Actions in Mice. In: 58th Annual Meeting of the American-College-of-Neuropsychopharmacology (ACNP).

Video

Kepecs, A. (November 2011) Talk from Adam Kepecs at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)