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Denissov, S., Van Driel, M., Voit, R., Hekkelman, M., Hulsen, T., Hernandez, N., Grummt, I., Wehrens, R., Stunnenberg, H. (February 2007) Identification of novel functional TBP-binding sites and general factor repertoires. Embo Journal, 26 (4). pp. 944-954. ISSN 0261-4189

Emran, F., Florens, L., Ma, B., Swanson, S. K., Washburn, M. P., Hernandez, N. (August 2006) A role for Yin Yang-1 (YY1) in the assembly of snRNA transcription complexes. Gene, 377. pp. 96-108. ISSN 0378-1119 (Print)

Saxena, A., Ma, B. C., Schramm, L., Hernandez, N. (November 2005) Structure-function analysis of the human TFIIB-related factor II protein reveals an essential role for the C-terminal domain in RNA polymerase III transcription. Molecular and Cellular Biology, 25 (21). pp. 9406-9418. ISSN 0270-7306

Kim, Y. S., Kim, J. M., Jung, D. L., Kang, J. E., Lee, S., Kim, J. S., Seol, W., Shin, H. C., Kwon, H. S., Van Lint, C., Hernandez, N., Hur, M. W. (June 2005) Artificial zinc finger fusions targeting Sp1-binding sites and the trans-activator-responsive element potently repress transcription and replication of HIV-1. Journal of Biological Chemistry, 280 (22). pp. 21545-21552. ISSN 0021-9258

Hu, P., Wu, S., Hernandez, N. (December 2004) A role for beta-actin in RNA polymerase III transcription. Genes Dev, 18 (24). pp. 3010-5. ISSN 0890-9369 (Print)

Hu, P., Samudre, K., Wu, S., Sun, Y., Hernandez, N. (October 2004) CK2 phosphorylation of Bdp1 executes cell cycle-specific RNA polymerase III transcription repression. Mol Cell, 16 (1). pp. 81-92. ISSN 1097-2765 (Print)

Hu, P., Wu, S., Hernandez, N. (September 2003) A minimal RNA polymerase III transcription system from human cells reveals positive and negative regulatory roles for CK2. Molecular Cell, 12 (3). pp. 699-709. ISSN 1097-2765

Pessler, F., Hernandez, N. (August 2003) Flexible DNA binding of the BTB/POZ-domain protein FBI-1. Journal of Biological Chemistry, 278 (31). pp. 29327-29335. ISSN 0021-9258

Zhao, X. M., Schramm, L., Hernandez, N., Herr, W. (January 2003) A shared surface of TBP directs RNA polymerase II and III transcription via association with different TFIIB family members. Molecular Cell, 11 (1). pp. 151-161. ISSN 1097-2765

Hu, P., Wu, S., Sun, Y. L., Yuan, C. C., Kobayashi, R., Myers, M. P., Hernandez, N. (November 2002) Characterization of human RNA polymerase III identifies orthologues for Saccharomyces cerevisiae RNA polymerase III subunits. Molecular and Cellular Biology, 22 (22). pp. 8044-8055. ISSN 0270-7306

Ma, B. C., Hernandez, N. (November 2002) Redundant cooperative interactions for assembly of a human U6 transcription initiation complex. Molecular and Cellular Biology, 22 (22). pp. 8067-8078. ISSN 0270-7306

Schramm, L., Hernandez, N. (October 2002) Recruitment of RNA polymerase III to its target promoters. Genes & Development, 16 (20). pp. 2593-2620. ISSN 0890-9369

Pendergrast, P. S., Wang, C., Hernandez, N., Huang, S. (March 2002) FBI-1 can stimulate HIV-1 Tat activity and is targeted to a novel subnuclear domain that includes the Tat-P-TEFb-containing nuclear speckles. Molecular Biology of the Cell, 13 (3). pp. 915-929. ISSN 1059-1524

Hernandez, N. (July 2001) Small nuclear RNA genes: a model system to study fundamental mechanisms of transcription. Journal of Biological Chemistry, 276 (29). pp. 26733-26736. ISSN 0021-9258

Chong, S. S., Hu, P., Hernandez, N. (June 2001) Reconstitution of transcription from the human U6 small nuclear RNA promoter with eight recombinant polypeptides and a partially purified RNA polymerase III complex. Journal of Biological Chemistry, 276 (23). pp. 20727-20734. ISSN 0021-9258

Zhao, X. Y., Pendergrast, P. S., Hernandez, N. (March 2001) A positioned nucleosome on the human U6 promoter allows recruitment of SNAP(c) by the Oct-1 POU domain. Molecular Cell, 7 (3). pp. 539-549. ISSN 1097-2765

Ma, B., Hernandez, N. (February 2001) A map of protein-protein contacts within the small nuclear RNA-activating protein complex SNAPc. Journal of Biological Chemistry, 276 (7). pp. 5027-5035. ISSN 0021-9258

Schramm, L., Pendergrast, P. S., Sun, Y. L., Hernandez, N. (October 2000) Different human TFIIIB activities direct RNA polymerase III transcription from TATA-containing and TATA-less promoters. Genes & Development, 14 (20). pp. 2650-2663. ISSN 0890-9369

Mittal, V., Ma, B., Hernandez, N. (July 1999) SNAP(c): a core promoter factor with a built-in DNA-binding damper that is deactivated by the Oct-1 POU domain. Genes & Development, 13 (14). pp. 1807-21. ISSN 0890-9369

Ford, E., Strubin, M., Hernandez, N. (November 1998) The Oct-1 POU domain activates snRNA gene transcription by contacting a region in the SNAPc largest subunit that bears sequence similarities to the Oct-1 coactivator OBF-1. Genes and Development, 12 (22). pp. 3528-40. ISSN 08909369 (ISSN)

Henry, R. W., Mittal, V., Ma, B., Kobayashi, R., Hernandez, N. (September 1998) SNAP19 mediates the assembly of a functional core promoter complex (SNAPc) shared by RNA polymerases II and III. Genes and Development, 12 (17). pp. 2664-72. ISSN 08909369 (ISSN)

Pessler, F., Hernandez, N. (February 1998) The HIV-1 inducer of short transcripts activates the synthesis of 5,6-dichloro-1-beta-D-benzimidazole-resistant short transcripts in vitro. Journal of Biological Chemistry, 273 (9). pp. 5375-84. ISSN 0021-9258 (Print)

Wong, M. W., Henry, R. W., Ma, B., Kobayashi, R., Klages, N., Matthias, P., Strubin, M., Hernandez, N. (January 1998) The large subunit of basal transcription factor SNAPc is a Myb domain protein that interacts with Oct-1. Molecular and Cellular Biology, 18 (1). pp. 368-77. ISSN 0270-7306 (Print)

Henry, R. W., Ford, E., Mital, R., Mittal, V., Hernandez, N. (1998) Crossing the line between RNA polymerases: transcription of human snRNA genes by RNA polymerases II and III. Cold Spring Harbor Symposia on Quantitative Biology, 63. pp. 111-20. ISSN 00917451 (ISSN)

Sepehri, S., Hernandez, N. (October 1997) The largest subunit of human RNA polymerase III is closely related to the largest subunit of yeast and trypanosome RNA polymerase III. Genome Research, 7 (10). pp. 1006-19. ISSN 1088-9051

Pessler, F., Pendergrast, P. S., Hernandez, N. (July 1997) Purification and characterization of FBI-1, a cellular factor that binds to the human immunodeficiency virus type 1 inducer of short transcripts. Molecular and Cellular Biology, 17 (7). pp. 3786-98. ISSN 0270-7306 (Print)

Ford, E., Hernandez, N. (June 1997) Characterization of a trimeric complex containing Oct-1, SNAPc, and DNA. Journal of Biological Chemistry, 272 (25). pp. 16048-55. ISSN 0021-9258

Mittal, V., Hernandez, N. (February 1997) Role for the amino-terminal region of human TBP in U6 snRNA transcription. Science, 275 (5303). pp. 1136-40. ISSN 0036-8075 (Print)

Pendergrast, P. S., Hernandez, N. (February 1997) RNA-targeted activators, but not DNA-targeted activators, repress the synthesis of short transcripts at the human immunodeficiency virus type 1 long terminal repeat. Journal of Virology, 71 (2). pp. 910-7. ISSN 0022-538X

Henry, R. W., Ma, B., Sadowski, C. L., Kobayashi, R., Hernandez, N. (December 1996) Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc. Embo J, 15 (24). pp. 7129-36. ISSN 0261-4189 (Print)

Mital, R., Kobayashi, R., Hernandez, N. (December 1996) RNA polymerase III transcription from the human U6 and adenovirus type 2 VAI promoters has different requirements for human BRF, a subunit of human TFIIIB. Molecular and Cellular Biology, 16 (12). pp. 7031-42. ISSN 0270-7306

Pendergrast, P. S., Morrison, D., Tansey, W. P., Hernandez, N. (August 1996) Mutations in the carboxy-terminal domain of TBP affect the synthesis of human immunodeficiency virus type 1 full-length and short transcripts similarly. Journal of Virology, 70 (8). pp. 5025-34. ISSN 0022-538X

Sadowski, C. L., Henry, R. W., Kobayashi, R., Hernandez, N. (April 1996) The SNAP45 subunit of the small nuclear RNA (snRNA) activating protein complex is required for RNA polymerase II and III snRNA gene transcription and interacts with the TATA box binding protein. Proceedings of the National Academy of Sciences, 93 (9). pp. 4289-93. ISSN 0027-8424 (Print)

Henry, R. W., Sadowski, C. L., Kobayashi, R., Hernandez, N. (April 1995) A TBP-TAF complex required for transcription of human snRNA genes by RNA polymerase II and III. Nature, 374 (6523). pp. 653-6. ISSN 0028-0836 (Print)

Hernandez, N., Sadowski, C. L., Henry, R. W., Mital, R., Lobo, S. (February 1994) Rna-Polymerase-Ii and Rna-Polymerase-Iii Transcription of the Human Snrna Genes. Journal of Cellular Biochemistry. p. 5. ISSN 0730-2312

Sadowski, C. L., Henry, R. W., Lobo, S. M., Hernandez, N. (February 1994) Targeting TBP to a non-TATA box cis-regulatory element: a TBP-containing complex activates transcription from snRNA promoters through the PSE. Genes & Development, 7 (8). pp. 1535-1548. ISSN 0890-9369

Sadowski, C. L., Henry, R. W., Lobo, S. M., Hernandez, N. (August 1993) Targeting TBP to a non-TATA box cis-regulatory element: a TBP-containing complex activates transcription from snRNA promoters through the PSE. Genes Dev, 7 (8). pp. 1535-48. ISSN 0890-9369 (Print)

Hernandez, N. (July 1993) TBP, a universal eukaryotic transcription factor? Genes Dev, 7 (7B). pp. 1291-308. ISSN 0890-9369 (Print)

Sheldon, M., Ratnasabapathy, R., Hernandez, N. (February 1993) Characterization of the inducer of short transcripts, a human immunodeficiency virus type 1 transcriptional element that activates the synthesis of short RNAs. Mol Cell Biol, 13 (2). pp. 1251-63. ISSN 0270-7306 (Print)

Lobo, S. M., Tanaka, M., Sullivan, M. L., Hernandez, N. (December 1992) A Tbp Complex Essential for Transcription from Tata-Less but Not Tata-Containing Rna Polymerase-Iii Promoters Is Part of the Tfiiib Fraction. Cell, 71 (6). pp. 1029-1040. ISSN 0092-8674

Lobo, S. M., Lister, J., Sullivan, M. L., Hernandez, N. (August 1991) The cloned RNA polymerase II transcription factor IID selects RNA polymerase III to transcribe the human U6 gene in vitro. Genes Dev, 5 (8). pp. 1477-89. ISSN 0890-9369 (Print)0890-9369 (Linking)

Sheldon, M., Ratnasabapathy, R., Johal, L., Hernandez, N. (1991) The Hiv-1 Ltr Contains an Unusual Element That Induces the Synthesis of Short Transcripts from Various Messenger Rna and Small Nuclear Rna Promoters. Journal of Cellular Biochemistry, 47 (Suppl ). p. 263.

Ratnasabapathy, R., Sheldon, M., Johal, L., Hernandez, N. (December 1990) The HIV-1 long terminal repeat contains an unusual element that induces the synthesis of short RNAs from various mRNA and snRNA promoters. Genes Dev, 4 (12A). pp. 2061-74. ISSN 0890-9369 (Print)0890-9369 (Linking)

Lobo, S. M., Ifill, S., Hernandez, N. (May 1990) cis-acting elements required for RNA polymerase II and III transcription in the human U2 and U6 snRNA promoters. Nucleic Acids Res, 18 (10). pp. 2891-9. ISSN 0305-1048 (Print)0305-1048 (Linking)

Hernandez, N., Lobo, S., Lister, J., Ifill, S., Ratnasabapathy, R., Sheldon, M., Johal, L. (1990) Transcription of the human U2 and U6 RNA genes. Mol Biol Rep, 14 (2-3). p. 167. ISSN 0301-4851 (Print)0301-4851 (Linking)

Lobo, S. M., Hernandez, N. (July 1989) A 7 bp mutation converts a human RNA polymerase II snRNA promoter into an RNA polymerase III promoter. Cell, 58 (1). pp. 55-67. ISSN 1097-4172

Tanaka, M., Grossniklaus, U., Herr, W., Hernandez, N. (December 1988) Activation of the U2 snRNA promoter by the octamer motif defines a new class of RNA polymerase II enhancer elements. Genes Dev, 2 (12B). pp. 1764-78. ISSN 0890-9369

Hernandez, N., Lucito, R. (October 1988) Elements required for transcription initiation of the human U2 snRNA gene coincide with elements required for snRNA 3' end formation. Embo J, 7 (10). pp. 3125-34.

Hernandez, N., Lucito, R. (1987) Formation of the 3' End of snRNAs. Molecular Biology Reports, 12 (3). p. 145. ISSN 0301-4851